Push button de novo assembly with the SPAdes Assembler 3.0!

We are excited to announce the release of the first 3rd party native application, the SPAdes Genome Assembler 3.0. This app was developed by the Algorithmic Biology Lab at the St. Petersburg Academic University of the Russian Academy of Sciences using the BaseSpace Native App Engine.

 

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SPAdes is the first open source de novo assembly application available to the BaseSpace community and can be used to assemble small genomes. The output from the SPAdes app includes various assembly statistics at the contig and scaffold levels.

 

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Sample B. Cereus data can be found and imported into your BaseSpace account from the following link

https://basespace.illumina.com/s/31oPTIRVFBXk

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